Clinical Data Guide
The purpose of the Know Your Tumor Clinical Data Guide is to provide SPARK end-users with information and guidance regarding clinical data tables and their descriptions.
Note:
This data guide assumes a baseline level knowledge of pancreatic cancer, genomic and clinical data and does not cover basic descriptions and explanations.
Data Table Name | Description |
---|---|
ASSESSMENTS | This file provides details on a patient's past assessments, such as Karnofsky Score, ECOG score, etc. |
CANCER | This is the primary file for information pertaining to a patient's primary or secondary diagnosis of a cancer/malignant neoplasm |
COMORBIDITY | This file provides a high-level overview of each instance of a comorbidity at the condition level for each patient |
CURATED_MOLECULAR_RESULTS | This file provides information pertaining to sequencing data as appears in abstracted clinical documents |
DIAGNOSTIC_REPORT_TUMOR_CHARACTERIZATION | This file is primarily used to identify the date of cancer diagnosis at a diagnostic_report_id level |
ENCOUNTERS | This file is primarily used to provide further information pertaining to encounters with the patient |
FOLLOW_UP_STATUS | This file provides information pertaining to the last known status of a patient's cancer |
HISTOLOGY | This is the primary file for tumor histology |
HISTOPATH_GRADE | This file provides information pertaining to the histology grade for each cancer/malignant neoplasm diagnosis at a more granular level |
IMAGING_PROCEDURES | This file provides detailed information for each instance of an imaging procedure |
LABS | This file provides detailed information pertaining to each instance of a laboratory test performed |
LINE_OF_THERAPY | This file provides Tempus-assigned line of therapy |
M_STAGE | This is the primary file for information pertaining to m-stage in the event of an m-stage category finding |
MEDICATIONS | This is the primary file used to identify the medication administered to a patient, along with additional relevant information |
MEDICATIONS_ROLLUP | This file reconciles CURATED and NATIVE medication records and accounts for multiple overlapping records |
METASTASES | This is the primary file for information pertaining to a patient's diagnosis of a secondary cancer/malignant neoplasm |
N_STAGE | This is the primary file for information pertaining to n-stage |
OUTCOMES | This file provides detailed information regarding the outcome of patient's care plan |
PATIENT | The file provides demographic information for each patient |
PROCEDURES | This file provides a description of any instance of a surgery performed on a patient |
RADIOTHERAPY | This file provides pertinent information of any instance of radiation therapy used on a patient |
RECURRENCE | Patients in this file have had an instance of recurrence of their primary cancer |
STAGE | This is the primary file for information pertaining to a tumor stage for each diagnosis with a tumor stage |
T_STAGE | This is the primary file for information pertaining to t-stage in the event of an t-stage category finding |
TREATMENT_STATUS | This file provides information pertaining to the treatment status of a patient |
VITALS | This file provides information pertaining to the patient's vitals |
Updated almost 2 years ago